Condition Guide

Your Gut Wall Has Cracks — And Everything Is Leaking Through

Increased intestinal permeability — commonly called "leaky gut" — is increasingly recognized as a driver of chronic inflammation, autoimmunity, and systemic illness.

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Your Gut Was Designed to Be Selective — Here's What Went Wrong

Your intestinal lining is meant to be selectively permeable — allowing nutrients through while keeping out pathogens, toxins, and undigested food particles. Leaky gut occurs when this barrier becomes compromised.

Immune Activation

Foreign particles in the bloodstream trigger immune responses, driving chronic inflammation.

Autoimmunity Link

Research links intestinal permeability to autoimmune diseases including Hashimoto's, RA, and MS.

Gut-Brain Connection

Leaky gut can lead to "leaky brain" — neuroinflammation causing brain fog and mood issues.

Food Sensitivities

Undigested food particles entering blood trigger immune reactions to previously tolerated foods.

The Damage Happens Slowly, Then All at Once

The intestinal lining is held together by "tight junctions" — protein structures that regulate what passes through. Various factors can damage these junctions:

Gluten (triggers zonulin release)
Chronic inflammation
Gut infections and dysbiosis
NSAIDs and certain medications
Alcohol
Chronic stress
Processed foods and sugar

It Doesn't Just Stay in Your Gut

Because leaky gut drives systemic inflammation, symptoms can appear throughout the body:

Digestive Symptoms

Bloating and gas
Diarrhea or constipation
Abdominal pain
Food sensitivities (especially new ones)

Systemic Symptoms

Chronic fatigue
Brain fog and poor concentration
Joint pain
Skin issues (acne, eczema, rashes)
Mood issues (anxiety, depression)
Headaches
Autoimmune conditions

The Autoimmune Connection

Researcher Alessio Fasano's work suggests that intestinal permeability may be a prerequisite for autoimmune disease development. Healing the gut is often a crucial step in managing autoimmune conditions.

How to Know for Sure

Zonulin: A protein that regulates tight junctions; elevated levels indicate permeability
Lactulose/mannitol test: Measures how these sugars pass through the gut wall
LPS antibodies: Antibodies to bacterial toxins that shouldn't be in blood
Food sensitivity testing: Multiple new sensitivities suggest permeability

Five Steps to Seal the Cracks

Functional medicine uses the "5R" framework to systematically heal the gut:

1

Remove

Eliminate triggers: gluten, dairy, sugar, alcohol, processed foods, infections, and problematic medications. You can't heal while continuously irritating the gut.

2

Replace

Add digestive support: digestive enzymes, HCl if needed, and bile support for proper breakdown of food. Inadequate digestion contributes to permeability.

3

Reinoculate

Restore healthy bacteria with high-quality probiotics, fermented foods, and prebiotic fiber. A healthy microbiome supports barrier function.

4

Repair

Heal the lining with targeted nutrients:

L-Glutamine: Primary fuel for intestinal cells
Zinc carnosine: Supports gut lining integrity
Collagen: Amino acids for tissue repair
Aloe vera: Soothes and heals mucosa
5

Rebalance

Address lifestyle factors: sleep, stress, movement, and ongoing dietary habits. The gut heals best in a state of rest and digest, not fight or flight.

What Your Gut Lining Needs to Repair

L-Glutamine: The primary fuel for intestinal cells; supports repair
Zinc carnosine: Specifically supports gut lining integrity
Collagen/bone broth: Provides amino acids for tissue repair
Omega-3s: Anti-inflammatory; support barrier function
Vitamin D: Supports tight junction integrity
Quercetin: Stabilizes mast cells; reduces intestinal inflammation

Your Kitchen Is Part of the Treatment

Healing Foods

Bone broth
Fermented foods (sauerkraut, kimchi, kefir)
Cooked vegetables
Wild-caught fish
Healthy fats (olive oil, avocado, coconut)

Foods to Avoid

Gluten (especially for those with sensitivities)
Processed foods and seed oils
Sugar and artificial sweeteners
Alcohol
Dairy (for some individuals)

Healing Starts in the Gut — Let's Begin

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Frequently Asked Questions

Yes — while the term "leaky gut" is informal, the underlying condition is well-documented in medical research as increased intestinal permeability. Studies show that when the tight junctions between intestinal cells become compromised, larger molecules can pass through and trigger immune responses throughout the body.

Common causes include chronic stress, overuse of NSAIDs and antibiotics, excessive alcohol, a diet high in processed foods and sugar, gluten (which triggers zonulin release in susceptible individuals), gut infections, dysbiosis (microbial imbalance), and environmental toxins. Often multiple factors work together to damage the intestinal barrier.

Symptoms extend far beyond the gut and can include bloating, gas, food sensitivities, skin issues (eczema, acne, rashes), joint pain, brain fog, fatigue, mood changes, and autoimmune flares. Because the immune system is activated, leaky gut can manifest as inflammation virtually anywhere in the body.

Diagnosis can include the lactulose-mannitol test (measures intestinal permeability directly), zonulin testing (a protein that regulates tight junctions), comprehensive stool analysis, and food sensitivity panels. Many practitioners also rely on symptom patterns and response to gut-healing protocols as diagnostic indicators.

The intestinal lining can regenerate relatively quickly — cells turn over every 3-5 days. However, fully restoring barrier integrity and resolving the associated immune activation typically takes 2-6 months with a comprehensive protocol. Severe cases with autoimmune involvement may require longer commitment.

Gut-healing foods include bone broth (rich in collagen and glutamine), fermented vegetables, cooked vegetables, and healthy fats. Key supplements include L-glutamine, zinc carnosine, collagen peptides, slippery elm, marshmallow root, and probiotics. Removing trigger foods is just as important as adding healing ones.

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